Zero-Shot Biomedical Extraction with LLMs

Zero-Shot Biomedical Extraction with LLMs

Benchmarking OpenAI models for extracting relationships from medical text without training

This research establishes a comprehensive benchmark for evaluating how effectively large language models can extract biomedical relationships without task-specific training.

  • Evaluates zero-shot performance of OpenAI models across diverse biomedical relation extraction tasks
  • Identifies patterns in model performance that can guide future applications
  • Quantifies the potential for reducing annotation costs and domain expertise requirements
  • Provides insights into how well generative AI handles specialized medical knowledge extraction

This research matters for healthcare and medical research by potentially accelerating biomedical discovery through automated extraction of relationships from medical literature without expensive domain-specific annotation.

A Benchmark for End-to-End Zero-Shot Biomedical Relation Extraction with LLMs: Experiments with OpenAI Models

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