
Boosting Phenotype Normalization Accuracy
A Simplified Retrieval Approach for Enhanced LLM Performance
This research introduces a simplified retriever that improves LLM accuracy in medical phenotype normalization without requiring explicit term definitions.
- Uses contextual word embeddings from BioBERT to find candidate matches
- Searches the Human Phenotype Ontology (HPO) more efficiently
- Demonstrates improved accuracy over standard LLM approaches
- Streamlines the normalization process with fewer computational resources
Why it matters: Accurate phenotype normalization is critical for medical diagnosis, research, and treatment planning. This simplified approach makes implementation more practical in clinical settings while maintaining high accuracy.
A Simplified Retriever to Improve Accuracy of Phenotype Normalizations by Large Language Models